PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.K1BY2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 304aa    MW: 35272.2 Da    PI: 6.9428
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.K1BY2genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B330.94.6e-10203300398
                  EE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
           B3   3 kvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                  k+l psd ++s rl++p +fa e+    g+ +  + ++  +++g ++ ++    +++     + ++ GW++F+ka+ Lk +D + F+ + +++ +++v
  Araip.K1BY2 203 KELQPSDIGAS-RLYVPVDFA-EIlktFGDAAIWTIISPPSPQGSTFLFQG--HQNPTNpfdIRFGLGWQDFCKAHVLKPKDLLAFRIVCKRNLRMMV 296
                  77878888887.5********.5669966778888899999**********..55555555799***********************99999999*** PP

                  EEE- CS
           B3  95 kvfr 98 
                   ++r
  Araip.K1BY2 297 DIRR 300
                  9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019365.89E-10200300IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.106.1E-9200298IPR015300DNA-binding pseudobarrel domain
CDDcd100174.70E-7201300No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MAISASRSDI NRRFMATMNS WPSDDDRLIK FRLVKVKGKR HFPKHFLARY GKEFGNTCFA  60
IDHCDNCLKI QLVGNHMNRV IEEDTFETIR AFYQAERDVT VKLWYVGFGL FYLSLWDKMN  120
FELALTQNPN FYVRDQLTSD KLDEIELNLN LKYVQKDEQP QVTSSSGDSP QSTDVEEVVG  180
PNTADPVEID NHMRDIIFHT YSKELQPSDI GASRLYVPVD FAEILKTFGD AAIWTIISPP  240
SPQGSTFLFQ GHQNPTNPFD IRFGLGWQDF CKAHVLKPKD LLAFRIVCKR NLRMMVDIRR  300
YPRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016169463.10.0PREDICTED: uncharacterized protein LOC107612157 isoform X1